BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008D05SP1|AL425850
(794 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1450 977 0.0
>3x_Contig1450
Length = 9648
Score = 977 bits (488), Expect = 0.0
Identities = 502/512 (98%)
Strand = Plus / Minus
Query: 1 gatccagcaagaaagwgatacgatgtcagtgagagattaattgaagtcatagtcggaagt 60
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 512 gatccagcaagaaagagatacgatgtcagtgagagattaattgaagtcatagacggaagt 453
Query: 61 aaaactggcgaggtcttacttgatgaaagtttatctttaatgaagaacgatccaccaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aaaactggcgaggtcttacttgatgaaagtttatctttaatgaagaacgatccaccaact 393
Query: 121 tcaattgtcggatggattgacctacttagtggcgagacttggaatctcctaaagatcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tcaattgtcggatggattgacctacttagtggcgagacttggaatctcctaaagatcaat 333
Query: 181 tatcaattgaaacaagttagggaaagattagcaaagggattggttgacaaaggtgttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tatcaattgaaacaagttagggaaagattagcaaagggattggttgacaaaggtgttttg 273
Query: 241 agaactgaaatgaagaacttctttttgtttgacatggccacacacccgatcactgataca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agaactgaaatgaagaacttctttttgtttgacatggccacacacccgatcactgataca 213
Query: 301 acttgcaaggaatctattaamagaagaatacyatcgatackggtttcaaggaatgctgaa 360
|||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||
Sbjct: 212 acttgcaaggaatctattaaaagaagaatactatcgatactggtttcaaggaatgctgaa 153
Query: 361 ttgacttataatacctatttcccacaagatgtttcctttaaatatatbagarccttgtct 420
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 152 ttgacttataatacctatttcccacaagatgtttcctttaaatatattagaaccttgtct 93
Query: 421 ttaatctgtggtgcttatggggctaatgttcyagaaaatgtcttggckaccttagattac 480
|||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||
Sbjct: 92 ttaatctgtggtgcttatggtgctaatgttctagaaaatgtcttggctaccttagattac 33
Query: 481 gaagtgagagatacagggtttgctcgtgcgga 512
||||||||||||||||||||||||||||||||
Sbjct: 32 gaagtgagagatacagggtttgctcgtgcgga 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7758
Number of Sequences: 1807
Number of extensions: 7758
Number of successful extensions: 224
Number of sequences better than 1.0e-20: 1
length of query: 794
length of database: 10,358,551
effective HSP length: 16
effective length of query: 778
effective length of database: 10,329,639
effective search space: 8036459142
effective search space used: 8036459142
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)